Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-mercaptopyruvate sulfurtransferase | RT97_29625 | Not Available | Positive | 6416347 - 6417255 | 32290.0 |
| metal abc transporter substrate-binding protein | RT97_29630 | Not Available | Positive | 6417252 - 6417830 | 20301.4 |
| methionine abc transporter atp-binding protein | RT97_29635 | Not Available | Positive | 6417835 - 6418581 | 27089.6 |
| peptide abc transporter permease | RT97_29640 | Not Available | Positive | 6418578 - 6419840 | 44980.3 |
| hypothetical protein | RT97_29645 | Not Available | Positive | 6419844 - 6420482 | 22625.3 |
| hypothetical protein | RT97_29650 | Not Available | Positive | 6420695 - 6421216 | 19632.2 |
| small-conductance mechanosensitive channel | RT97_29655 | Not Available | Positive | 6421374 - 6423404 | 75407.5 |
| peptidase m20 | RT97_29660 | Not Available | Negative | 6423426 - 6424694 | 44143.3 |
| hypothetical protein | RT97_29665 | Not Available | Positive | 6425060 - 6425410 | 12669.8 |
| hypothetical protein | RT97_29670 | Not Available | Positive | 6425511 - 6425921 | 14770.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
