Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase i | RT97_29420 | Not Available | Negative | 6372021 - 6373043 | 36729.2 |
| carbon monoxide dehydrogenase | RT97_29425 | Not Available | Negative | 6373057 - 6373734 | 23028.3 |
| von willebrand factor a | RT97_29430 | Not Available | Negative | 6373766 - 6374980 | 44501.1 |
| atpase | RT97_29435 | Not Available | Negative | 6375009 - 6375911 | 33443.2 |
| carbon monoxide dehydrogenase | RT97_29440 | Not Available | Negative | 6375979 - 6376770 | 27280.8 |
| carbon monoxide dehydrogenase | RT97_29445 | Not Available | Negative | 6376794 - 6379232 | 87409.9 |
| carbon monoxide dehydrogenase | RT97_29450 | Not Available | Negative | 6379246 - 6379743 | 17259.9 |
| histidine kinase | RT97_29455 | Not Available | Positive | 6379922 - 6381058 | 40674.6 |
| polyketide cyclase | RT97_29460 | Not Available | Negative | 6381081 - 6381458 | 13406.6 |
| microcystin degradation protein mlrc | RT97_29470 | Not Available | Negative | 6381980 - 6383452 | 51460.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
