Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter substrate-binding protein | RT97_29370 | Not Available | Positive | 6362355 - 6363323 | 34768.6 |
| c4-dicarboxylate abc transporter permease | RT97_29375 | Not Available | Positive | 6363413 - 6363946 | 19620.1 |
| c4-dicarboxylate abc transporter permease | RT97_29380 | Not Available | Positive | 6363986 - 6365299 | 47235.5 |
| protein crcb | RT97_29385 | Not Available | Positive | 6365334 - 6365711 | 13075.5 |
| monovalent cation/h+ antiporter subunit a | RT97_29390 | Not Available | Positive | 6365789 - 6368731 | 106273.0 |
| monovalent cation/h+ antiporter subunit c | RT97_29395 | Not Available | Positive | 6368731 - 6369081 | 12437.6 |
| monovalent cation/h+ antiporter subunit d | RT97_29400 | Not Available | Positive | 6369164 - 6370882 | 59601.0 |
| monovalent cation/h+ antiporter subunit e | RT97_29405 | Not Available | Positive | 6370879 - 6371370 | 18213.8 |
| cation:proton antiporter | RT97_29410 | Not Available | Positive | 6371367 - 6371645 | 10040.9 |
| cation:proton antiporter | RT97_29415 | Not Available | Positive | 6371642 - 6371998 | 12712.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
