Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_29225 | Not Available | Positive | 6331269 - 6331781 | 18206.0 |
| chemotaxis protein chey | RT97_29230 | Not Available | Negative | 6331812 - 6333335 | 55442.6 |
| histidine kinase | RT97_29235 | Not Available | Negative | 6333360 - 6334439 | 40185.2 |
| signal peptide protein | RT97_29240 | Not Available | Negative | 6334447 - 6334956 | 17841.9 |
| glutamine synthetase | RT97_29245 | Not Available | Negative | 6335200 - 6336615 | 52306.0 |
| damage-inducible protein | RT97_29250 | Not Available | Negative | 6336762 - 6337574 | 29588.8 |
| membrane protein | RT97_29255 | Not Available | Negative | 6337559 - 6338446 | 31816.8 |
| fatty acid hydroxylase | RT97_29260 | Not Available | Negative | 6338500 - 6339474 | 37235.8 |
| peptidase a8 | RT97_29265 | Not Available | Negative | 6339492 - 6340301 | 29132.7 |
| hypothetical protein | RT97_29270 | Not Available | Negative | 6340285 - 6341304 | 36814.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
