Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chey | RT97_29115 | Not Available | Negative | 6312040 - 6312435 | 14297.2 |
| hypothetical protein | RT97_29120 | Not Available | Positive | 6313125 - 6313433 | 10161.8 |
| atp-dependent dna helicase recq | RT97_29125 | Not Available | Positive | 6313433 - 6315181 | 63407.3 |
| formate dehydrogenase | RT97_29130 | Not Available | Negative | 6315233 - 6317533 | 83107.9 |
| hypothetical protein | RT97_29140 | Not Available | Negative | 6318753 - 6318962 | 7364.32 |
| alpha/beta hydrolase | RT97_29150 | Not Available | Positive | 6320548 - 6320786 | 8268.03 |
| hypothetical protein | RT97_29155 | Not Available | Positive | 6320787 - 6321920 | 41521.6 |
| porin | RT97_29160 | Not Available | Negative | 6321921 - 6322529 | 21008.3 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | RT97_29165 | Not Available | Positive | 6322811 - 6323440 | 22421.0 |
| osmotically inducible protein c | RT97_29170 | Not Available | Negative | 6323459 - 6323908 | 15790.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
