Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | RT97_29060 | Not Available | Positive | 6298621 - 6300876 | 83088.7 |
| transcription elongation factor greb | RT97_29065 | Not Available | Negative | 6300902 - 6301480 | 21247.7 |
| hypothetical protein | RT97_29070 | Not Available | Positive | 6301647 - 6302345 | 26568.5 |
| hypothetical protein | RT97_29075 | Not Available | Negative | 6302366 - 6302809 | 15963.4 |
| Trna-arg | Not Available | Not Available | Positive | 6302942 - 6303018 | Not Available |
| transcriptional regulator | RT97_29085 | Not Available | Negative | 6303190 - 6303813 | 22575.2 |
| hemolysin d | RT97_29090 | Not Available | Positive | 6303957 - 6305171 | 42678.2 |
| multidrug transporter | RT97_29095 | Not Available | Positive | 6305187 - 6308348 | 112526.0 |
| multidrug transporter | RT97_29100 | Not Available | Positive | 6308359 - 6309825 | 52268.7 |
| pyridine nucleotide-disulfide oxidoreductase | RT97_29110 | Not Available | Positive | 6310530 - 6311831 | 46647.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
