Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_29010 | Not Available | Negative | 6290271 - 6291044 | 27957.4 |
| Trna-ser | Not Available | Not Available | Positive | 6291893 - 6291980 | Not Available |
| coproporphyrinogen iii oxidase | RT97_29020 | Not Available | Negative | 6292022 - 6293293 | 46961.9 |
| purine ntp phosphatase | RT97_29025 | Not Available | Negative | 6293301 - 6293900 | 20999.1 |
| ribonuclease ph | RT97_29030 | Not Available | Negative | 6293957 - 6294688 | 25734.9 |
| serine/threonine protein phosphatase | RT97_29035 | Not Available | Negative | 6294728 - 6295633 | 32823.1 |
| serine/threonine protein kinase | RT97_29040 | Not Available | Negative | 6295635 - 6296642 | 37812.9 |
| hypothetical protein | RT97_29045 | Not Available | Positive | 6296734 - 6297657 | 33534.4 |
| guanylate kinase | RT97_29050 | Not Available | Positive | 6297672 - 6298292 | 23023.5 |
| dna-directed rna polymerase subunit omega | RT97_29055 | Not Available | Positive | 6298324 - 6298527 | 7416.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
