Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin oxidoreductase | RT97_28960 | Not Available | Negative | 6280759 - 6282495 | 63889.0 |
| alanine-phosphoribitol ligase | RT97_28965 | Not Available | Negative | 6282510 - 6283748 | 44546.1 |
| short-chain dehydrogenase | RT97_28970 | Not Available | Negative | 6283787 - 6284578 | 27224.5 |
| arac family transcriptional regulator | RT97_28975 | Not Available | Positive | 6284773 - 6285786 | 37276.9 |
| lysr family transcriptional regulator | RT97_28980 | Not Available | Negative | 6285878 - 6286804 | 33794.6 |
| alpha/beta hydrolase | RT97_28985 | Not Available | Positive | 6286924 - 6287871 | 33994.0 |
| oxidoreductase | RT97_28990 | Not Available | Positive | 6287986 - 6288777 | 27953.3 |
| hypothetical protein | RT97_28995 | Not Available | Negative | 6288847 - 6289206 | 12763.7 |
| hypothetical protein | RT97_29000 | Not Available | Negative | 6289296 - 6289679 | 13153.1 |
| gtp-binding protein | RT97_29005 | Not Available | Negative | 6289747 - 6290235 | 17440.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
