Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_28905 | Not Available | Negative | 6270804 - 6271492 | 27145.5 |
| hypothetical protein | RT97_28915 | Not Available | Negative | 6272544 - 6273019 | 16930.9 |
| hypothetical protein | RT97_28920 | Not Available | Positive | 6273047 - 6273300 | 9838.55 |
| transcriptional regulator | RT97_28925 | Not Available | Positive | 6273301 - 6274038 | 26825.0 |
| hypothetical protein | RT97_28930 | Not Available | Positive | 6274328 - 6275565 | 45802.7 |
| catalase | RT97_28935 | Not Available | Positive | 6275566 - 6276153 | 22169.9 |
| 2,2-dialkylglycine decarboxylase | RT97_28940 | Not Available | Negative | 6276198 - 6277511 | 46747.4 |
| lysr family transcriptional regulator | RT97_28945 | Not Available | Positive | 6277673 - 6278530 | 30494.1 |
| hypothetical protein | RT97_28950 | Not Available | Positive | 6278736 - 6279455 | 26564.6 |
| carboxymethylenebutenolidase | RT97_28955 | Not Available | Negative | 6279489 - 6280709 | 44739.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
