Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter | RT97_28850 | Not Available | Positive | 6254330 - 6255355 | 37081.3 |
| c4-dicarboxylate abc transporter permease | RT97_28855 | Not Available | Positive | 6255383 - 6255883 | 18792.1 |
| c4-dicarboxylate abc transporter permease | RT97_28860 | Not Available | Positive | 6255880 - 6257181 | 45892.5 |
| 4-hydroxybenzoyl-coa thioesterase | RT97_28865 | Not Available | Positive | 6257196 - 6257615 | 15675.7 |
| hypothetical protein | RT97_28870 | Not Available | Positive | 6257795 - 6264064 | 198757.0 |
| protein tyrosine phosphatase | RT97_28875 | Not Available | Negative | 6264030 - 6264530 | 18044.3 |
| hypothetical protein | RT97_28880 | Not Available | Positive | 6264924 - 6265133 | 8119.64 |
| magnesium abc transporter atpase | RT97_28890 | Not Available | Positive | 6266144 - 6268909 | 101176.0 |
| methyltransferase | RT97_28895 | Not Available | Positive | 6269167 - 6269883 | 25174.3 |
| aldehyde dehydrogenase | RT97_28900 | Not Available | Negative | 6270000 - 6270803 | 27996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
