Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | RT97_28795 | Not Available | Negative | 6237542 - 6239065 | 54317.8 |
| guanine permease | RT97_28800 | Not Available | Negative | 6239168 - 6240568 | 48572.9 |
| lysr family transcriptional regulator | RT97_28805 | Not Available | Negative | 6240644 - 6241636 | 36586.5 |
| aldehyde oxidase | RT97_28810 | Not Available | Negative | 6241799 - 6244249 | 88097.1 |
| fad-binding molybdopterin dehydrogenase | RT97_28815 | Not Available | Negative | 6244252 - 6245874 | 58487.9 |
| iron transporter | RT97_28820 | Not Available | Negative | 6246148 - 6247401 | 45515.4 |
| lysr family transcriptional regulator | RT97_28825 | Not Available | Negative | 6247460 - 6248374 | 34012.5 |
| sorbosone dehydrogenase | RT97_28830 | Not Available | Positive | 6248650 - 6249690 | 38334.4 |
| indolepyruvate ferredoxin oxidoreductase | RT97_28840 | Not Available | Positive | 6250454 - 6252613 | 77758.7 |
| indolepyruvate oxidoreductase | RT97_28845 | Not Available | Positive | 6252622 - 6254238 | 57543.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
