Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | RT97_28745 | Not Available | Negative | 6227852 - 6228814 | 33222.0 |
| 2-pyrone-4,6-dicarboxylate hydrolase | RT97_28750 | Not Available | Negative | 6228811 - 6229659 | 30918.5 |
| formyl-coa transferase | RT97_28755 | Not Available | Negative | 6229715 - 6230899 | 42706.0 |
| hypothetical protein | RT97_28760 | Not Available | Negative | 6230921 - 6231913 | 34060.3 |
| citryl-coa lyase | RT97_28765 | Not Available | Negative | 6231962 - 6232831 | 30502.7 |
| lysr family transcriptional regulator | RT97_28770 | Not Available | Positive | 6232909 - 6233799 | 32421.7 |
| hypothetical protein | RT97_28775 | Not Available | Negative | 6233811 - 6234191 | 13882.9 |
| membrane protein | RT97_28780 | Not Available | Negative | 6234262 - 6235434 | 41279.1 |
| abc transporter permease | RT97_28785 | Not Available | Negative | 6235485 - 6236405 | 32296.3 |
| sugar abc transporter permease | RT97_28790 | Not Available | Negative | 6236407 - 6237549 | 40131.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
