Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase c14 | RT97_28645 | Not Available | Negative | 6204936 - 6206909 | 70930.7 |
| hypothetical protein | RT97_28650 | Not Available | Negative | 6206983 - 6207671 | 26918.4 |
| hypothetical protein | RT97_28655 | Not Available | Negative | 6208084 - 6208952 | 30864.8 |
| hypothetical protein | RT97_28660 | Not Available | Positive | 6208953 - 6209151 | 6887.31 |
| ribose abc transporter permease | RT97_28665 | Not Available | Positive | 6209148 - 6210128 | 33214.9 |
| isovaleryl-coa dehydrogenase | RT97_28670 | Not Available | Negative | 6210307 - 6211479 | 42435.7 |
| arac family transcriptional regulator | RT97_28675 | Not Available | Positive | 6211620 - 6212648 | 38681.7 |
| thioredoxin | RT97_28680 | Not Available | Negative | 6212655 - 6212981 | 11862.1 |
| had family hydrolase | RT97_28685 | Not Available | Negative | 6213054 - 6213746 | 24367.3 |
| peptide synthetase | RT97_28690 | Not Available | Negative | 6214240 - 6218213 | 145527.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
