Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | RT97_28425 | Not Available | Positive | 6142496 - 6144388 | 68557.0 |
| abc transporter substrate-binding protein | RT97_28430 | Not Available | Positive | 6144639 - 6145637 | 34130.9 |
| histidine kinase | RT97_28435 | Not Available | Positive | 6145634 - 6147631 | 70343.9 |
| arac family transcriptional regulator | RT97_28440 | Not Available | Negative | 6147720 - 6148697 | 35623.8 |
| isochorismatase | RT97_28445 | Not Available | Positive | 6148793 - 6149425 | 22828.0 |
| hemagglutinin | RT97_28450 | Not Available | Negative | 6149633 - 6155023 | 176149.0 |
| peptide abc transporter permease | RT97_28455 | Not Available | Negative | 6155026 - 6156741 | 61458.8 |
| hypothetical protein | RT97_28460 | Not Available | Negative | 6156874 - 6159012 | 76649.5 |
| hydroperoxidase | RT97_28470 | Not Available | Negative | 6162360 - 6164555 | 80296.0 |
| transglutaminase | RT97_28475 | Not Available | Positive | 6165046 - 6165864 | 30523.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
