Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin v synthesis protein | RT97_28325 | Not Available | Positive | 6120004 - 6120489 | 17048.4 |
| amidophosphoribosyltransferase | RT97_28330 | Not Available | Positive | 6120501 - 6122006 | 55114.2 |
| o-succinylhomoserine sulfhydrylase | RT97_28335 | Not Available | Positive | 6122015 - 6123235 | 42953.5 |
| glutamyl-trna synthetase | RT97_28340 | Not Available | Positive | 6123245 - 6124633 | 51589.6 |
| Trna-ala | Not Available | Not Available | Positive | 6124706 - 6124781 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 6124837 - 6124912 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 6124982 - 6125058 | Not Available |
| hypothetical protein | RT97_28360 | Not Available | Negative | 6125265 - 6126173 | 33623.5 |
| tartrate dehydrogenase | RT97_28365 | Not Available | Positive | 6126402 - 6127484 | 39261.0 |
| abc transporter permease | RT97_28370 | Not Available | Positive | 6127517 - 6128467 | 33884.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
