Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate racemase | RT97_28170 | Not Available | Positive | 6093613 - 6094320 | 25872.2 |
| alpha/beta hydrolase | RT97_28175 | Not Available | Negative | 6094317 - 6095243 | 34943.5 |
| aldo/keto reductase | RT97_28180 | Not Available | Positive | 6095359 - 6096420 | 39184.8 |
| membrane protein | RT97_28185 | Not Available | Positive | 6096417 - 6096911 | 17867.9 |
| glycerol-3-phosphate acyltransferase | RT97_28190 | Not Available | Positive | 6096981 - 6097616 | 22215.5 |
| aminoacrylate peracid reductase | RT97_28195 | Not Available | Positive | 6097625 - 6097978 | 12640.2 |
| peptidase a2 | RT97_28200 | Not Available | Negative | 6098092 - 6098739 | 22499.3 |
| nucleotide-binding protein | RT97_28205 | Not Available | Negative | 6098744 - 6099229 | 17852.7 |
| udp-n-acetylenolpyruvoylglucosamine reductase | RT97_28210 | Not Available | Positive | 6099273 - 6100325 | 38203.9 |
| hypothetical protein | RT97_28215 | Not Available | Positive | 6100325 - 6101158 | 29873.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
