Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | RT97_28120 | Not Available | Negative | 6083482 - 6084228 | 27701.4 |
| dioxygenase | RT97_28125 | Not Available | Negative | 6084876 - 6085691 | 29061.9 |
| abc transporter atp-binding protein | RT97_28130 | Not Available | Positive | 6085927 - 6086799 | 32095.6 |
| methionine abc transporter atp-binding protein | RT97_28135 | Not Available | Positive | 6086792 - 6087454 | 23520.6 |
| methionine abc transporter atpase | RT97_28140 | Not Available | Positive | 6087499 - 6088320 | 29744.1 |
| hypothetical protein | RT97_28145 | Not Available | Positive | 6088346 - 6088699 | 12690.8 |
| monooxygenase | RT97_28150 | Not Available | Negative | 6089243 - 6090592 | 48758.6 |
| methionine-binding protein | RT97_28155 | Not Available | Negative | 6090589 - 6091422 | 30090.1 |
| lysr family transcriptional regulator | RT97_28160 | Not Available | Negative | 6091524 - 6092423 | 32097.7 |
| aldo/keto reductase | RT97_28165 | Not Available | Positive | 6092551 - 6093561 | 35253.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
