Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_28070 | Not Available | Negative | 6071031 - 6072905 | 65710.3 |
| phosphohydrolase | RT97_28075 | Not Available | Negative | 6073129 - 6073701 | 21238.4 |
| phosphate acetyltransferase | RT97_28080 | Not Available | Negative | 6073818 - 6074729 | 30855.8 |
| xre family transcriptional regulator | RT97_28085 | Not Available | Negative | 6074966 - 6075520 | 20181.2 |
| hypothetical protein | RT97_28090 | Not Available | Positive | 6075836 - 6076087 | 9262.94 |
| Trna-thr | Not Available | Not Available | Positive | 6078067 - 6078142 | Not Available |
| fructose 1,6-bisphosphatase | RT97_28100 | Not Available | Negative | 6078168 - 6079184 | 37575.3 |
| hypothetical protein | RT97_28105 | Not Available | Negative | 6079252 - 6080049 | 28082.2 |
| aminopeptidase n | RT97_28110 | Not Available | Negative | 6080099 - 6082804 | 100357.0 |
| haloacid dehalogenase | RT97_28115 | Not Available | Negative | 6082791 - 6083477 | 24770.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
