Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein cobs | RT97_28015 | Not Available | Negative | 6057669 - 6058661 | 36947.1 |
| iclr family transcriptional regulator | RT97_28020 | Not Available | Negative | 6058685 - 6059503 | 29546.7 |
| sulfoacetaldehyde acetyltransferase | RT97_28025 | Not Available | Positive | 6059685 - 6061508 | 65776.2 |
| acetate kinase | RT97_28030 | Not Available | Positive | 6061526 - 6062704 | 41095.0 |
| transcriptional regulator | RT97_28035 | Not Available | Negative | 6062803 - 6063735 | 33755.5 |
| formate dehydrogenase | RT97_28040 | Not Available | Positive | 6063933 - 6066872 | 108579.0 |
| dmso reductase | RT97_28050 | Not Available | Positive | 6067613 - 6068545 | 33424.9 |
| gluconolaconase | RT97_28055 | Not Available | Negative | 6068542 - 6069471 | 32914.8 |
| hypothetical protein | RT97_28060 | Not Available | Positive | 6069741 - 6069992 | 8744.41 |
| hypothetical protein | RT97_28065 | Not Available | Positive | 6070017 - 6071006 | 37373.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
