Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_27965 | Not Available | Positive | 6047836 - 6048279 | 15654.6 |
| ribonuclease h | RT97_27970 | Not Available | Positive | 6048321 - 6048782 | 16434.6 |
| glutathione peroxidase | RT97_27975 | Not Available | Positive | 6048827 - 6049075 | 9299.14 |
| hypothetical protein | RT97_27980 | Not Available | Negative | 6049092 - 6050027 | 33031.0 |
| hypothetical protein | RT97_27985 | Not Available | Negative | 6050125 - 6050922 | 27536.2 |
| long-chain fatty acid--coa ligase | RT97_27990 | Not Available | Negative | 6050919 - 6052445 | 54233.4 |
| sulfoacetaldehyde dehydrogenase | RT97_27995 | Not Available | Negative | 6052442 - 6053884 | 50804.6 |
| laci family transcriptional regulator | RT97_28000 | Not Available | Negative | 6054006 - 6055004 | 34867.2 |
| iclr family transcriptional regulator | RT97_28005 | Not Available | Negative | 6055001 - 6055795 | 28225.9 |
| cobalt chelatase | RT97_28010 | Not Available | Negative | 6055933 - 6057672 | 64593.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
