Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_27915 | Not Available | Negative | 6037858 - 6038043 | 6615.83 |
| hypothetical protein | RT97_27920 | Not Available | Positive | 6038072 - 6038641 | 21340.9 |
| cyclopropane-fatty-acyl-phospholipid synthase | RT97_27925 | Not Available | Positive | 6038844 - 6039890 | 40448.8 |
| membrane protein | RT97_27930 | Not Available | Positive | 6040012 - 6040806 | 28973.7 |
| hypothetical protein | RT97_27935 | Not Available | Positive | 6040803 - 6041456 | 23509.7 |
| major facilitator transporter | RT97_27940 | Not Available | Negative | 6041466 - 6042788 | 47506.3 |
| choline dehydrogenase | RT97_27945 | Not Available | Negative | 6042842 - 6044464 | 58654.9 |
| iclr family transcriptional regulator | RT97_27950 | Not Available | Positive | 6044562 - 6045377 | 28821.1 |
| hypothetical protein | RT97_27955 | Not Available | Negative | 6045562 - 6046581 | 38516.5 |
| hypothetical protein | RT97_27960 | Not Available | Negative | 6046595 - 6047698 | 40827.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
