Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_02745 | Not Available | Positive | 587483 - 588046 | 20325.6 |
| homoserine acetyltransferase | RT97_02750 | Not Available | Positive | 588263 - 589420 | 42469.2 |
| methionine biosynthesis protein metw | RT97_02755 | Not Available | Positive | 589417 - 590004 | 21741.2 |
| impact protein | RT97_02760 | Not Available | Positive | 590027 - 590614 | 20613.9 |
| ion transporter | RT97_02765 | Not Available | Negative | 590559 - 591473 | 33390.7 |
| cell shape determination protein ccma | RT97_02770 | Not Available | Positive | 591620 - 592144 | 17955.4 |
| hypothetical protein | RT97_02775 | Not Available | Negative | 592141 - 592923 | 29332.8 |
| peptidase m20 | RT97_02780 | Not Available | Positive | 593015 - 594526 | 53985.4 |
| alpha/beta hydrolase | RT97_02785 | Not Available | Positive | 594561 - 595403 | 30189.2 |
| major facilitator transporter | RT97_02790 | Not Available | Negative | 595414 - 596583 | 40972.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
