Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_27810 | Not Available | Positive | 6014133 - 6017328 | 115527.0 |
| hypothetical protein | RT97_27820 | Not Available | Negative | 6018532 - 6020139 | 58418.9 |
| hypothetical protein | RT97_27825 | Not Available | Negative | 6020136 - 6020614 | 16780.7 |
| hypothetical protein | RT97_27830 | Not Available | Negative | 6020615 - 6021468 | 29646.3 |
| hypothetical protein | RT97_27835 | Not Available | Negative | 6021469 - 6022685 | 45597.1 |
| hypothetical protein | RT97_27840 | Not Available | Negative | 6022730 - 6024277 | 56305.9 |
| phospholipase | RT97_27845 | Not Available | Negative | 6024346 - 6026493 | 79955.4 |
| hypothetical protein | RT97_27850 | Not Available | Negative | 6026544 - 6027215 | 24548.0 |
| porin | RT97_27855 | Not Available | Positive | 6027216 - 6027767 | 19838.3 |
| taurine abc transporter substrate-binding protein | RT97_27860 | Not Available | Positive | 6028418 - 6029428 | 35846.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
