Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | RT97_27745 | Not Available | Positive | 6002207 - 6002566 | 13406.7 |
| phenylalanyl-trna synthetase | RT97_27750 | Not Available | Positive | 6002680 - 6003756 | 39977.3 |
| phenylalanyl-trna synthetase subunit beta | RT97_27755 | Not Available | Positive | 6003794 - 6006235 | 87887.6 |
| integration host factor subunit alpha | RT97_27760 | Not Available | Positive | 6006238 - 6006609 | 13468.0 |
| merr family transcriptional regulator | RT97_27765 | Not Available | Positive | 6006683 - 6007138 | 17797.5 |
| Trna-pro | Not Available | Not Available | Positive | 6007165 - 6007241 | Not Available |
| hypothetical protein | RT97_27775 | Not Available | Positive | 6007649 - 6007855 | 7677.24 |
| hypothetical protein | RT97_27780 | Not Available | Negative | 6009345 - 6009542 | 7550.88 |
| peptide synthetase | RT97_27800 | Not Available | Positive | 6011322 - 6013504 | 80133.7 |
| hypothetical protein | RT97_27805 | Not Available | Negative | 6013505 - 6014132 | 23827.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
