Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase subunit beta | RT97_27640 | Not Available | Negative | 5981048 - 5981560 | 18799.6 |
| cytoplasmic protein | RT97_27645 | Not Available | Negative | 5981912 - 5983018 | 41859.9 |
| endonuclease | RT97_27650 | Not Available | Negative | 5983067 - 5983945 | 32064.4 |
| hypothetical protein | RT97_27655 | Not Available | Negative | 5984035 - 5985222 | 42538.1 |
| oxidoreductase | RT97_27660 | Not Available | Negative | 5985236 - 5986399 | 43609.4 |
| hypothetical protein | RT97_27665 | Not Available | Negative | 5986432 - 5987862 | 51404.1 |
| abc transporter atp-binding protein | RT97_27670 | Not Available | Negative | 5987871 - 5988650 | 28439.0 |
| nitrate abc transporter substrate-binding protein | RT97_27675 | Not Available | Negative | 5988694 - 5989710 | 36299.0 |
| abc transporter permease | RT97_27680 | Not Available | Negative | 5989752 - 5990525 | 28144.8 |
| laci family transcriptional regulator | RT97_27685 | Not Available | Negative | 5990562 - 5991545 | 34138.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
