Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_27540 | Not Available | Positive | 5963040 - 5963318 | 9988.0 |
| alpha/beta hydrolase | RT97_27545 | Not Available | Negative | 5963410 - 5963760 | 11957.7 |
| fmdb family transcriptional regulator | RT97_27550 | Not Available | Negative | 5963913 - 5964257 | 11899.9 |
| formamidase | RT97_27555 | Not Available | Negative | 5964267 - 5965499 | 44527.0 |
| urea abc transporter atp-binding protein | RT97_27560 | Not Available | Negative | 5965524 - 5966213 | 25254.8 |
| urea abc transporter atp-binding protein | RT97_27565 | Not Available | Negative | 5966229 - 5966972 | 27410.5 |
| urea abc transporter permease | RT97_27570 | Not Available | Negative | 5966998 - 5968200 | 43219.3 |
| urea abc transporter permease | RT97_27575 | Not Available | Negative | 5968232 - 5969146 | 32620.0 |
| integrase | RT97_27580 | Not Available | Positive | 5969374 - 5970867 | 55915.1 |
| atpase aaa | RT97_27585 | Not Available | Positive | 5970864 - 5971667 | 29847.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
