Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s7 | RT97_27475 | Not Available | Positive | 5947067 - 5947540 | 18037.2 |
| elongation factor g | RT97_27480 | Not Available | Positive | 5947637 - 5949736 | 77051.7 |
| beta-glucosidase | RT97_27485 | Not Available | Positive | 5949937 - 5951501 | 56022.2 |
| hypothetical protein | RT97_27490 | Not Available | Negative | 5951512 - 5951862 | 12093.2 |
| phospholipase c | RT97_27500 | Not Available | Negative | 5953925 - 5956183 | 82041.0 |
| phosphonate abc transporter permease | RT97_27505 | Not Available | Negative | 5956592 - 5957590 | 36714.2 |
| phosphonate abc transporter substrate-binding protein | RT97_27515 | Not Available | Negative | 5958417 - 5959352 | 32594.2 |
| transcriptional regulator | RT97_27525 | Not Available | Negative | 5960349 - 5961182 | 30291.6 |
| methyltransferase | RT97_27530 | Not Available | Positive | 5961388 - 5962092 | 25229.4 |
| hypothetical protein | RT97_27535 | Not Available | Negative | 5962153 - 5962926 | 27699.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
