Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methylcrotonyl-coa carboxylase | RT97_27425 | Not Available | Positive | 5937737 - 5939737 | 72042.0 |
| hypothetical protein | RT97_27430 | Not Available | Positive | 5939832 - 5940782 | 34253.7 |
| ethyl tert-butyl ether degradation protein ethd | RT97_27435 | Not Available | Negative | 5940811 - 5941125 | 11363.7 |
| glyoxylate reductase | RT97_27440 | Not Available | Positive | 5941217 - 5942137 | 33797.8 |
| iclr family transcriptional regulator | RT97_27445 | Not Available | Positive | 5942228 - 5942977 | 27495.4 |
| cupin | RT97_27450 | Not Available | Positive | 5942974 - 5943366 | 14288.1 |
| abc transporter substrate-binding protein | RT97_27455 | Not Available | Positive | 5943392 - 5944405 | 35254.8 |
| alpha/beta hydrolase | RT97_27460 | Not Available | Positive | 5944504 - 5945136 | 22078.7 |
| cytochrome c550 | RT97_27465 | Not Available | Positive | 5945177 - 5946346 | 41914.8 |
| 30s ribosomal protein s12 | RT97_27470 | Not Available | Positive | 5946541 - 5946918 | 13962.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
