Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_27375 | Not Available | Positive | 5929036 - 5929476 | 15868.7 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | RT97_27380 | Not Available | Positive | 5929545 - 5930186 | 23180.2 |
| phosphatidate cytidylyltransferase | RT97_27385 | Not Available | Positive | 5930183 - 5931139 | 35271.9 |
| bacteriocin-protection protein | RT97_27390 | Not Available | Positive | 5931190 - 5931771 | 21564.7 |
| hypothetical protein | RT97_27395 | Not Available | Negative | 5931790 - 5932221 | 15004.7 |
| amp-binding protein | RT97_27400 | Not Available | Positive | 5932372 - 5934048 | 61979.9 |
| methylcrotonoyl-coa carboxylase | RT97_27405 | Not Available | Positive | 5934045 - 5935733 | 60046.9 |
| enoyl-coa hydratase | RT97_27410 | Not Available | Positive | 5935747 - 5936547 | 28304.9 |
| hypothetical protein | RT97_27415 | Not Available | Positive | 5936526 - 5937056 | 19568.8 |
| membrane protein | RT97_27420 | Not Available | Positive | 5937070 - 5937744 | 23589.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
