Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | RT97_27315 | Not Available | Negative | 5914895 - 5916076 | 42742.8 |
| hypothetical protein | RT97_27320 | Not Available | Positive | 5916284 - 5916532 | 9325.96 |
| hypothetical protein | RT97_27330 | Not Available | Negative | 5917319 - 5918437 | 42490.8 |
| serine/threonine protein phosphatase | RT97_27340 | Not Available | Negative | 5920458 - 5921327 | 32978.2 |
| hypothetical protein | RT97_27345 | Not Available | Positive | 5921422 - 5923167 | 63961.5 |
| cobalt transporter | RT97_27350 | Not Available | Negative | 5923172 - 5924131 | 34830.6 |
| atp-dependent dna helicase ruvb | RT97_27355 | Not Available | Negative | 5924138 - 5925202 | 39074.1 |
| cdp-alcohol phosphatidyltransferase | RT97_27360 | Not Available | Positive | 5925285 - 5925899 | 22000.3 |
| hypothetical protein | RT97_27365 | Not Available | Positive | 5925934 - 5927700 | 65298.0 |
| phosphatase | RT97_27370 | Not Available | Positive | 5927697 - 5929043 | 50275.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
