Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | RT97_27265 | Not Available | Negative | 5903027 - 5903809 | 26986.5 |
| luxr family transcriptional regulator | RT97_27270 | Not Available | Positive | 5903917 - 5906625 | 99077.1 |
| luxr family transcriptional regulator | RT97_27275 | Not Available | Negative | 5906629 - 5907711 | 40199.8 |
| hypothetical protein | RT97_27280 | Not Available | Positive | 5907883 - 5908335 | 15499.3 |
| hypothetical protein | RT97_27285 | Not Available | Positive | 5908547 - 5909386 | 30470.2 |
| hypothetical protein | RT97_27290 | Not Available | Positive | 5909383 - 5909763 | 14424.4 |
| acyl-coa dehydrogenase | RT97_27295 | Not Available | Negative | 5909786 - 5910934 | 41973.3 |
| fatty-acid--coa ligase | RT97_27300 | Not Available | Negative | 5910973 - 5912532 | 56689.7 |
| carnitine dehydratase | RT97_27305 | Not Available | Negative | 5912550 - 5913653 | 38900.6 |
| acyl-coa dehydrogenase | RT97_27310 | Not Available | Negative | 5913742 - 5914884 | 40571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
