Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_27090 | Not Available | Negative | 5866282 - 5866701 | 15683.3 |
| hypothetical protein | RT97_27095 | Not Available | Negative | 5866713 - 5867183 | 16425.5 |
| hypothetical protein | RT97_27100 | Not Available | Positive | 5867630 - 5867902 | 10076.3 |
| hypothetical protein | RT97_27105 | Not Available | Positive | 5868223 - 5870514 | 82132.6 |
| hypothetical protein | RT97_27110 | Not Available | Negative | 5870523 - 5871092 | 20955.9 |
| hypothetical protein | RT97_27115 | Not Available | Negative | 5871205 - 5872587 | 50743.3 |
| restriction endonuclease subunit m | RT97_27130 | Not Available | Positive | 5876280 - 5878259 | 74687.9 |
| restriction endonuclease | RT97_27135 | Not Available | Negative | 5878411 - 5879439 | 37486.1 |
| hypothetical protein | RT97_27140 | Not Available | Negative | 5879549 - 5880124 | 21803.1 |
| hypothetical protein | RT97_27145 | Not Available | Negative | 5880121 - 5880468 | 12905.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
