Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide isomerase | RT97_27025 | Not Available | Positive | 5855679 - 5856398 | 26273.5 |
| peptidase m61 | RT97_27030 | Not Available | Positive | 5856398 - 5858230 | 67304.9 |
| hypothetical protein | RT97_27035 | Not Available | Negative | 5858227 - 5858829 | 21751.3 |
| enoyl-coa hydratase | RT97_27040 | Not Available | Positive | 5858956 - 5859735 | 27690.7 |
| hypothetical protein | RT97_27045 | Not Available | Negative | 5859757 - 5860137 | 12862.3 |
| dna-directed rna polymerase subunit sigma-24 | RT97_27060 | Not Available | Negative | 5861181 - 5861846 | 24382.9 |
| hypothetical protein | RT97_27065 | Not Available | Positive | 5861983 - 5863500 | 53917.8 |
| Trna-met | Not Available | Not Available | Positive | 5863554 - 5863630 | Not Available |
| hypothetical protein | RT97_27075 | Not Available | Positive | 5863713 - 5865038 | 50253.3 |
| hypothetical protein | RT97_27085 | Not Available | Negative | 5865976 - 5866269 | 9856.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
