Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | RT97_26970 | Not Available | Negative | 5844564 - 5845655 | 39225.0 |
| laci family transcriptional regulator | RT97_26975 | Not Available | Positive | 5845860 - 5846813 | 33210.6 |
| sugar abc transporter atpase | RT97_26980 | Not Available | Positive | 5846832 - 5848466 | 58875.5 |
| abc transporter permease | RT97_26985 | Not Available | Positive | 5848463 - 5849449 | 33565.0 |
| laci family transcriptional regulator | RT97_26990 | Not Available | Positive | 5849512 - 5850609 | 39270.0 |
| ribokinase | RT97_26995 | Not Available | Positive | 5850606 - 5851586 | 33849.7 |
| ribose pyranase | RT97_27000 | Not Available | Positive | 5851583 - 5851981 | 13992.3 |
| fe-s protein | RT97_27005 | Not Available | Negative | 5851983 - 5852864 | 32465.0 |
| hypothetical protein | RT97_27015 | Not Available | Positive | 5853709 - 5854452 | 26146.3 |
| ubiquinone biosynthesis protein ubih | RT97_27020 | Not Available | Positive | 5854519 - 5855646 | 40378.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
