Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_26870 | Not Available | Positive | 5822767 - 5823273 | 18855.4 |
| hypothetical protein | RT97_26875 | Not Available | Positive | 5823279 - 5823806 | 18673.9 |
| hypothetical protein | RT97_26880 | Not Available | Positive | 5823803 - 5824504 | 26586.5 |
| hypothetical protein | RT97_26885 | Not Available | Positive | 5824506 - 5825222 | 27045.1 |
| hypothetical protein | RT97_26890 | Not Available | Positive | 5825312 - 5825584 | 10426.2 |
| paar repeat-containing protein | RT97_26895 | Not Available | Positive | 5825581 - 5825844 | 8726.67 |
| chemotaxis protein chea | RT97_26900 | Not Available | Negative | 5825924 - 5831974 | 216486.0 |
| chemotaxis protein | RT97_26905 | Not Available | Negative | 5832159 - 5834477 | 81999.9 |
| chemotaxis protein chew | RT97_26910 | Not Available | Negative | 5834520 - 5835053 | 18887.4 |
| chemotaxis protein chey | RT97_26915 | Not Available | Negative | 5835073 - 5835438 | 13533.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
