Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_26815 | Not Available | Negative | 5811390 - 5811896 | 18353.7 |
| hypothetical protein | RT97_26820 | Not Available | Positive | 5812557 - 5812766 | 7698.07 |
| hypothetical protein | RT97_26825 | Not Available | Negative | 5813363 - 5813650 | 9611.26 |
| glycerol acyltransferase | RT97_26830 | Not Available | Negative | 5814017 - 5814763 | 27631.2 |
| dihydroorotase | RT97_26835 | Not Available | Negative | 5814785 - 5816068 | 44183.2 |
| aspartate carbamoyltransferase catalytic subunit | RT97_26840 | Not Available | Negative | 5816208 - 5817170 | 34853.4 |
| uracil phosphoribosyltransferase | RT97_26845 | Not Available | Negative | 5817259 - 5817765 | 17936.8 |
| holliday junction resolvase | RT97_26850 | Not Available | Negative | 5817902 - 5818327 | 15465.2 |
| hypothetical protein | RT97_26855 | Not Available | Negative | 5818446 - 5819045 | 21653.0 |
| deoxyribodipyrimidine photolyase | RT97_26860 | Not Available | Positive | 5819046 - 5820554 | 56552.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
