Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyl-coenzyme a transferase | RT97_26765 | Not Available | Negative | 5801928 - 5803184 | 45871.7 |
| oxalyl-coa decarboxylase | RT97_26770 | Not Available | Negative | 5803219 - 5805042 | 64058.3 |
| cyclic nucleotide-binding protein | RT97_26775 | Not Available | Positive | 5805195 - 5805803 | 23295.5 |
| transporter | RT97_26780 | Not Available | Negative | 5805963 - 5806799 | 30405.8 |
| tricarboxylate transporter | RT97_26785 | Not Available | Negative | 5806827 - 5808359 | 53882.0 |
| tripartite tricarboxylate transporter tctb | RT97_26790 | Not Available | Negative | 5808379 - 5808900 | 18768.4 |
| tricarboxylate transporter | RT97_26795 | Not Available | Negative | 5809061 - 5810083 | 36513.3 |
| Trna-arg | Not Available | Not Available | Positive | 5810353 - 5810427 | Not Available |
| membrane protein | RT97_26805 | Not Available | Negative | 5810477 - 5810812 | 11981.0 |
| hypothetical protein | RT97_26810 | Not Available | Negative | 5811092 - 5811295 | 7684.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
