Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase | RT97_02640 | Not Available | Negative | 561211 - 562458 | 44825.9 |
| hypothetical protein | RT97_02645 | Not Available | Negative | 562591 - 563082 | 16908.1 |
| hypothetical protein | RT97_02650 | Not Available | Negative | 563205 - 563729 | 18312.3 |
| hypothetical protein | RT97_02660 | Not Available | Negative | 567565 - 569778 | 81620.1 |
| dna gyrase subunit b | RT97_02665 | Not Available | Negative | 569865 - 572486 | 95929.4 |
| dna polymerase iii subunit beta | RT97_02670 | Not Available | Negative | 572622 - 573728 | 40401.9 |
| chromosomal replication initiator protein dnaa | RT97_02675 | Not Available | Negative | 573818 - 575197 | 51447.0 |
| 50s ribosomal protein l34 | RT97_02680 | Not Available | Positive | 575485 - 575619 | 5110.49 |
| ribonuclease p | RT97_02685 | Not Available | Positive | 575721 - 576131 | 14679.7 |
| hypothetical protein | RT97_02690 | Not Available | Positive | 576128 - 576415 | 10435.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
