Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein | RT97_26715 | Not Available | Negative | 5790786 - 5792114 | 47451.4 |
| transcriptional regulator | RT97_26720 | Not Available | Negative | 5792993 - 5793940 | 34865.6 |
| pyruvate kinase | RT97_26725 | Not Available | Negative | 5794058 - 5795479 | 50867.4 |
| 2-dehydropantoate 2-reductase | RT97_26730 | Not Available | Negative | 5795652 - 5796665 | 35803.4 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | RT97_26735 | Not Available | Negative | 5796723 - 5797499 | 27464.1 |
| succinate--coa ligase | RT97_26740 | Not Available | Negative | 5797562 - 5798461 | 31573.5 |
| succinyl-coa synthetase subunit beta | RT97_26745 | Not Available | Negative | 5798463 - 5799632 | 41461.3 |
| hypothetical protein | RT97_26750 | Not Available | Negative | 5799637 - 5799966 | 12855.9 |
| formyl-coenzyme a transferase | RT97_26755 | Not Available | Negative | 5800194 - 5801441 | 45387.6 |
| histidine kinase | RT97_26760 | Not Available | Negative | 5801458 - 5801892 | 15802.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
