Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_26665 | Not Available | Positive | 5776655 - 5778574 | 70119.8 |
| hypothetical protein | RT97_26670 | Not Available | Positive | 5778604 - 5782680 | 142328.0 |
| hypothetical protein | RT97_26675 | Not Available | Positive | 5782786 - 5783094 | 11146.6 |
| formate dehydrogenase | RT97_26680 | Not Available | Negative | 5783117 - 5783425 | 10779.8 |
| formate dehydrogenase | RT97_26685 | Not Available | Negative | 5783476 - 5784363 | 30994.9 |
| formate dehydrogenase | RT97_26690 | Not Available | Negative | 5784382 - 5787258 | 104550.0 |
| formate dehydrogenase | RT97_26695 | Not Available | Negative | 5787310 - 5788872 | 55247.6 |
| formate dehydrogenase | RT97_26700 | Not Available | Negative | 5788869 - 5789315 | 15984.1 |
| lysr family transcriptional regulator | RT97_26705 | Not Available | Negative | 5789535 - 5790410 | 31911.8 |
| hypothetical protein | RT97_26710 | Not Available | Positive | 5790537 - 5790773 | 8570.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
