Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | RT97_26605 | Not Available | Negative | 5764539 - 5765042 | 18439.8 |
| hypothetical protein | RT97_26620 | Not Available | Positive | 5769747 - 5770181 | 16245.1 |
| lysr family transcriptional regulator | RT97_26625 | Not Available | Negative | 5770281 - 5771243 | 33943.3 |
| protocatechuate 3,4-dioxygenase | RT97_26630 | Not Available | Positive | 5771381 - 5772106 | 27402.4 |
| protocatechuate 3,4-dioxygenase | RT97_26635 | Not Available | Positive | 5772127 - 5772729 | 21631.2 |
| cytochrome c | RT97_26640 | Not Available | Negative | 5772799 - 5773494 | 24426.2 |
| atpase aaa | RT97_26645 | Not Available | Positive | 5773657 - 5774511 | 32424.3 |
| hypothetical protein | RT97_26650 | Not Available | Positive | 5774508 - 5774759 | 8636.68 |
| gcn5 family acetyltransferase | RT97_26655 | Not Available | Positive | 5774787 - 5775374 | 21776.1 |
| von willebrand factor a | RT97_26660 | Not Available | Positive | 5775393 - 5776580 | 46112.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
