Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_26555 | Not Available | Positive | 5750969 - 5751400 | 15171.8 |
| pilus assembly protein tade | RT97_26560 | Not Available | Positive | 5751438 - 5751911 | 16922.8 |
| pilus assembly protein tadg | RT97_26565 | Not Available | Positive | 5751908 - 5752381 | 16470.9 |
| hypothetical protein | RT97_26570 | Not Available | Positive | 5752398 - 5754500 | 72058.6 |
| fis family transcriptional regulator | RT97_26575 | Not Available | Positive | 5754519 - 5755949 | 52213.2 |
| transporter | RT97_26580 | Not Available | Negative | 5756089 - 5757684 | 57923.4 |
| secretion protein hyld | RT97_26585 | Not Available | Negative | 5757681 - 5758997 | 48117.8 |
| abc transporter | RT97_26590 | Not Available | Negative | 5759157 - 5760971 | 65104.2 |
| hypothetical protein | RT97_26595 | Not Available | Negative | 5761062 - 5761340 | 10634.1 |
| mur ligase | RT97_26600 | Not Available | Negative | 5761337 - 5764420 | 113503.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
