Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_26505 | Not Available | Positive | 5739177 - 5740247 | 37353.4 |
| hypothetical protein | RT97_26510 | Not Available | Positive | 5740214 - 5741728 | 54590.9 |
| peptidase a24 | RT97_26515 | Not Available | Positive | 5742347 - 5742844 | 17605.0 |
| pilus assembly protein cpab | RT97_26520 | Not Available | Positive | 5742927 - 5743922 | 34410.8 |
| membrane protein | RT97_26525 | Not Available | Positive | 5743970 - 5745406 | 50565.2 |
| histidine kinase | RT97_26530 | Not Available | Positive | 5745439 - 5746731 | 45992.0 |
| pilus assembly protein cpaf | RT97_26535 | Not Available | Positive | 5746738 - 5748054 | 48745.5 |
| secretion system protein | RT97_26540 | Not Available | Positive | 5748047 - 5749039 | 35831.7 |
| secretion system protein | RT97_26545 | Not Available | Positive | 5749036 - 5750010 | 35663.9 |
| hypothetical protein | RT97_26550 | Not Available | Positive | 5750052 - 5750972 | 31575.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
