Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | RT97_26395 | Not Available | Negative | 5716331 - 5716720 | 13457.0 |
| amino acid abc transporter substrate-binding protein | RT97_26400 | Not Available | Positive | 5716876 - 5717910 | 36996.1 |
| amino acid abc transporter permease | RT97_26405 | Not Available | Positive | 5717907 - 5718908 | 35634.9 |
| amino acid abc transporter permease | RT97_26410 | Not Available | Positive | 5718905 - 5719963 | 38721.4 |
| xre family transcriptional regulator | RT97_26425 | Not Available | Positive | 5721944 - 5722480 | 18948.8 |
| hypothetical protein | RT97_26430 | Not Available | Positive | 5722482 - 5722850 | 13447.9 |
| aldo/keto reductase | RT97_26435 | Not Available | Positive | 5722847 - 5723905 | 39540.2 |
| dna-binding protein | RT97_26440 | Not Available | Negative | 5723912 - 5724310 | 13897.5 |
| phosphoglucomutase | RT97_26445 | Not Available | Negative | 5724328 - 5725980 | 59098.2 |
| haloacid dehalogenase | RT97_26450 | Not Available | Negative | 5725977 - 5726660 | 25776.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
