Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxymyristoyl-acp dehydratase | RT97_26345 | Not Available | Positive | 5703911 - 5704381 | 16420.5 |
| 3-ketoacyl-acp reductase | RT97_26350 | Not Available | Positive | 5704378 - 5705109 | 25100.4 |
| mobilization protein | RT97_26355 | Not Available | Negative | 5705125 - 5705817 | 25320.8 |
| phosphatidylinositol kinase | RT97_26360 | Not Available | Negative | 5705891 - 5707183 | 46711.9 |
| addiction module antidote protein | RT97_26365 | Not Available | Negative | 5707180 - 5707497 | 10972.0 |
| hypothetical protein | RT97_26370 | Not Available | Negative | 5707564 - 5708322 | 27672.1 |
| chromosome segregation protein smc | RT97_26375 | Not Available | Positive | 5708437 - 5711952 | 130139.0 |
| cell division protein ftsz | RT97_26380 | Not Available | Positive | 5711967 - 5713067 | 38894.9 |
| nad-dependent dna ligase liga | RT97_26385 | Not Available | Positive | 5713092 - 5715176 | 75746.4 |
| peptide deformylase | RT97_26390 | Not Available | Positive | 5715763 - 5716302 | 19862.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
