Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_26290 | Not Available | Negative | 5692474 - 5693040 | 20493.3 |
| nadph-dependent fmn reductase | RT97_26295 | Not Available | Negative | 5693189 - 5694262 | 39734.9 |
| pirin | RT97_26300 | Not Available | Negative | 5694345 - 5695241 | 32652.8 |
| gcn5 family acetyltransferase | RT97_26305 | Not Available | Negative | 5695319 - 5696080 | 27702.8 |
| membrane protein | RT97_26310 | Not Available | Positive | 5696281 - 5696548 | 9860.94 |
| coa ligase | RT97_26315 | Not Available | Positive | 5696565 - 5698274 | 60604.8 |
| acyl-coa synthetase | RT97_26320 | Not Available | Positive | 5698274 - 5699278 | 37581.4 |
| exporter | RT97_26330 | Not Available | Positive | 5699900 - 5702311 | 83979.9 |
| polysaccharide deacetylase | RT97_26335 | Not Available | Positive | 5702311 - 5703150 | 30132.5 |
| methyltransferase type 11 | RT97_26340 | Not Available | Positive | 5703147 - 5703914 | 27825.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
