Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | RT97_26240 | Not Available | Positive | 5682445 - 5683512 | 39512.5 |
| signal peptide protein | RT97_26245 | Not Available | Positive | 5683604 - 5684071 | 17931.1 |
| abc transporter permease | RT97_26250 | Not Available | Negative | 5684136 - 5685116 | 34759.9 |
| abc transporter permease | RT97_26255 | Not Available | Negative | 5685133 - 5686008 | 31230.8 |
| abc transporter permease | RT97_26260 | Not Available | Negative | 5686144 - 5687337 | 42837.4 |
| abc transporter permease | RT97_26265 | Not Available | Negative | 5687472 - 5688668 | 42690.9 |
| histidinol dehydrogenase | RT97_26270 | Not Available | Negative | 5688711 - 5689418 | 25495.4 |
| amino acid abc transporter atp-binding protein | RT97_26275 | Not Available | Negative | 5689420 - 5690190 | 28151.2 |
| n-acylglucosamine 2-epimerase | RT97_26280 | Not Available | Positive | 5690463 - 5691671 | 45727.2 |
| serine/threonine protein kinase | RT97_26285 | Not Available | Positive | 5691941 - 5692375 | 15114.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
