Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | RT97_02590 | Not Available | Negative | 548642 - 551182 | 94308.1 |
| pyruvate dehydrogenase | RT97_02595 | Not Available | Positive | 551399 - 554125 | 101581.0 |
| dihydrolipoamide acetyltransferase | RT97_02600 | Not Available | Positive | 554175 - 555845 | 56622.1 |
| mfs transporter | RT97_02605 | Not Available | Positive | 555842 - 556435 | 21773.0 |
| dihydrolipoamide acetyltransferase | RT97_02610 | Not Available | Positive | 556432 - 556731 | 9890.79 |
| hypothetical protein | RT97_02615 | Not Available | Positive | 556860 - 557648 | 29165.1 |
| cardiolipin synthase | RT97_02620 | Not Available | Positive | 557662 - 558945 | 48477.3 |
| membrane protein | RT97_02625 | Not Available | Positive | 558959 - 559912 | 34511.2 |
| lipid a 3-o-deacylase | RT97_02630 | Not Available | Negative | 559916 - 560491 | 20903.6 |
| hypothetical protein | RT97_02635 | Not Available | Positive | 560692 - 561189 | 17591.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
