Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_26190 | Not Available | Positive | 5669890 - 5670264 | 13198.6 |
| rna polymerase sigma70 factor | RT97_26195 | Not Available | Positive | 5670261 - 5671493 | 43984.7 |
| dna mismatch repair protein mutt | RT97_26200 | Not Available | Negative | 5671503 - 5672225 | 26510.9 |
| hypothetical protein | RT97_26205 | Not Available | Positive | 5672328 - 5672891 | 20441.4 |
| adp-ribosylglycohydrolase | RT97_26210 | Not Available | Positive | 5672888 - 5673787 | 31290.1 |
| beta-lactamase | RT97_26215 | Not Available | Negative | 5673801 - 5675270 | 51939.1 |
| abc transporter permease | RT97_26220 | Not Available | Positive | 5675356 - 5677965 | 90062.4 |
| methyltransferase | RT97_26225 | Not Available | Negative | 5677985 - 5678704 | 26198.4 |
| pbsx family transcriptional regulator | RT97_26230 | Not Available | Negative | 5678710 - 5681274 | 92937.4 |
| cysteine synthase | RT97_26235 | Not Available | Positive | 5681369 - 5682445 | 38847.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
