Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon monoxide dehydrogenase | RT97_26140 | Not Available | Negative | 5659574 - 5661820 | 80094.4 |
| 2fe-2s ferredoxin | RT97_26145 | Not Available | Negative | 5661833 - 5662306 | 16143.3 |
| cytochrome c | RT97_26150 | Not Available | Negative | 5662347 - 5662646 | 10041.1 |
| arac family transcriptional regulator | RT97_26155 | Not Available | Positive | 5662972 - 5663847 | 31926.9 |
| trna dimethylallyltransferase | RT97_26160 | Not Available | Positive | 5663993 - 5664958 | 34387.3 |
| abc transporter atp-binding protein | RT97_26165 | Not Available | Positive | 5664955 - 5665602 | 22898.8 |
| serine dehydratase | RT97_26170 | Not Available | Negative | 5665728 - 5666684 | 34020.7 |
| gntr family transcriptional regulator | RT97_26175 | Not Available | Positive | 5666799 - 5667500 | 25404.3 |
| proline hydroxylase | RT97_26180 | Not Available | Positive | 5667497 - 5668372 | 32926.2 |
| flagellar basal body p-ring biosynthesis protein flga | RT97_26185 | Not Available | Positive | 5668377 - 5669738 | 48734.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
